Open generated Phylo-Movies examples directly in the browser without backend processing. The demo includes a norovirus sliding-window recombination dataset, IQ-TREE bootstrap rogue-taxon tree series, an IQ-TREE fast-search trajectory, a paper figure example, a quick MSA-linked tree set, and a 1000-taxon scale-limit payload.
Each row in the live demo opens a precomputed Phylo-Movies JSON payload. No upload form or BranchArchitect backend is required for these bundled examples.
Workflow: Sliding-window MSA with SH-aLRT
Scale: 334 taxa, 17 IQ-TREE SH-aLRT window trees, 8,058 bp alignment
Generated IQ-TREE GTR+G fast-search browser payload with SH-aLRT support scores for norovirus recombination breakpoint exploration and genome-window topology changes.
Search terms: norovirus, recombination, sliding-window phylogenetics, IQ-TREE, SH-aLRT
Workflow: Precomputed trees
Scale: 14 taxa, 2 trees
Small publication figure example for inspecting Phylo-Movies tree transitions and timeline controls.
Search terms: phylogenetic tree interpolation, tree morphing, publication example
Workflow: Bootstrap tree series
Scale: 24 taxa, 200 composition-ranked bootstrap trees
Generated static payload for rogue-taxon movement review across IQ-TREE bootstrap replicate trees.
Search terms: bootstrap trees, rogue taxa, IQ-TREE, SPR moves
Workflow: Bootstrap tree series
Scale: 24 taxa, 200 weighted-RF ordered bootstrap trees
Secondary weighted-RF ordered bootstrap payload where Ostrich remains the rank-1 recurrent mover with 38 SPR moves and total movie complexity drops to 166 SPR moves.
Search terms: bootstrap trees, weighted RF, rogue taxa, Ostrich, SPR moves
Workflow: Bootstrap tree series
Scale: 125 taxa, 200 composition-ranked bootstrap trees
Larger generated bootstrap tree-series payload for topology-change and rogue-taxon exploration.
Search terms: bootstrap trees, rogue taxa, large phylogenetic trees
Workflow: Bootstrap tree series
Scale: 125 taxa, 200 weighted-RF ordered bootstrap trees
Secondary weighted-RF ordered bootstrap payload where Seq112 remains the rank-1 recurrent mover with 70 SPR moves and total movie complexity drops to 661 SPR moves.
Search terms: bootstrap trees, weighted RF, rogue taxa, Seq112, SPR moves
Workflow: Tree search trajectory
Scale: 500 taxa, 21 fast-search trajectory trees
Complete IQ-TREE fast-search trajectory payload for inspecting topology movement during tree search.
Search terms: IQ-TREE, tree search, topology search, large phylogenetic trees
Workflow: Trees plus MSA
Scale: 30 taxa, 10 trees
Synthetic MSA-linked demo for checking alignment-window synchronization in the browser.
Search terms: multiple sequence alignment, MSA viewer, tree synchronization
Inspect topology changes and SH-aLRT support across generated IQ-TREE trees inferred from the 334-taxon norovirus MSA.
Review subtree movement, split support, and SPR recurrence across composition-ranked IQ-TREE bootstrap tree series.
Inspect how topology changes across the complete fast-search trajectory for a 500-taxon benchmark alignment.
Open a generated 1000-taxon two-tree payload for browser scale-limit inspection.
These generated examples support the Phylo-Movies publication workflow described in Phylo-Movies: Animating Phylogenetic Trees from Sliding-Window Analyses.
Publication DOI: 10.64898/2026.04.01.715821
Software DOI: 10.5281/zenodo.20488923
The manuscript videos show installation, MSA synchronisation, norovirus, and bootstrap rogue-taxon workflows.